poli.objective_repository.gfp_cbas.cbas_wrapper.CBASVAEWrapper

class poli.objective_repository.gfp_cbas.cbas_wrapper.CBASVAEWrapper(AA: int, L: int)

__init__(AA: int, L: int)

Methods

__init__(AA, L)
decode(z[, grad])	Returns an NxLxAA tensor.
decode_samples_from_encoder(x, num_samples)	For a single one hot encoded LxAA vector this method samples around the encoded sequence and returns the decoded sequences.
encode(x[, grad])	Turns a one hot encoded LxAA vector into a continuous lower dimensional vector.
encode_sequences(seqs)
get_latent_dimensionality()
get_max_llh_sequence(proba)
get_wildtype_distribution()	Returns a distribution to represent the wild-type.
transform_sequences_to_atoms(x)	Turns a sequence into an approximately Dirac distribution around the sequence.